Transcript: ENSDART00000136962.2 slc13a4-202

Description

solute carrier family 13 member 4 [Source:ZFIN;Acc:ZDB-GENE-070424-71]

Gene Synonyms

zgc:162495

Location

About this transcript

This transcript has 7 exons, is annotated with 7 domains and features, is associated with 262 variant alleles and maps to 116 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000129252.4	slc13a4-201	2787	610aa	ENSDARP00000106725.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A5J0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136962.2	slc13a4-202	598	200aa	ENSDARP00000121635.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R5V0	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 598 bps, Translation length: 200 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000136962.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.