Transcript: ENSDART00000136928.2 DSCAM-201

Description

Down syndrome cell adhesion molecule a [Source:ZFIN;Acc:ZDB-GENE-050310-7]

Location

Chromosome 10: 38,813,389-38,957,741 forward strand.

About this transcript

This transcript has 32 exons, is annotated with 115 domains and features, is associated with 4104 variant alleles and maps to 117 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000024865.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000184416.1	DSCAM-202	6267	2036aa	ENSDARP00000153729.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000125045.4	DSCAM-204	7164	2024aa	ENSDARP00000108538.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q53CM6	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000192990.1	DSCAM-203	6081	2026aa	ENSDARP00000149863.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000136928.2	DSCAM-201	6036	2010aa	ENSDARP00000123419.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 32, Coding exons: 32, Transcript length: 6,036 bps, Translation length: 2,010 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000136928.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000136928.2 DSCAM-201

Summary

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Transcript: ENSDART00000136928.2 DSCAM-201

Summary

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