Transcript: ENSDART00000136910.2 armc1l-201

Description

armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]

Gene Synonyms

cb398, sb:cb398, zgc:56200

Location

About this transcript

This transcript has 7 exons, is annotated with 11 domains and features, is associated with 74 variant alleles and maps to 152 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000136910.2	armc1l-201	1218	273aa	ENSDARP00000116279.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R385	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140505.3	armc1l-202	462	104aa	ENSDARP00000114296.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QBK0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,218 bps, Translation length: 273 residues

Version

ENSDART00000136910.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.