Transcript: ENSDART00000136898.3 lpp-201

Description

LIM domain containing preferred translocation partner in lipoma [Source:NCBI gene (formerly Entrezgene);Acc:573024]

Location

About this transcript

This transcript has 11 exons, is annotated with 32 domains and features, is associated with 8374 variant alleles and maps to 539 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000136898.3	lpp-201	6399	556aa	ENSDARP00000113831.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32TT89	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000188056.1	lpp-202	1686	556aa	ENSDARP00000145164.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32TT89	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 11, Coding exons: 9, Transcript length: 6,399 bps, Translation length: 556 residues

Version

ENSDART00000136898.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.