Transcript: ENSDART00000136878.2 ercc5-202

Description

excision repair cross-complementation group 5 [Source:ZFIN;Acc:ZDB-GENE-050327-28]

Location

About this transcript

This transcript has 3 exons, is associated with 203 variant alleles and maps to 36 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000144406.3	ercc5-203	3283	1010aa	ENSDARP00000123630.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QJS3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000192494.1	ercc5-204	1071	356aa	ENSDARP00000148316.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000031635.6	ercc5-201	750	249aa	ENSDARP00000033024.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000136878.2	ercc5-202	839	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 839 bps,

Version

ENSDART00000136878.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.