Transcript: ENSDART00000136836.2 rab11fip3-201

Description

RAB11 family interacting protein 3 (class II) [Source:ZFIN;Acc:ZDB-GENE-040724-138]

Location

About this transcript

This transcript has 12 exons, is annotated with 22 domains and features, is associated with 3069 variant alleles and maps to 169 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000191918.1	rab11fip3-202	8178	1875aa	ENSDARP00000149009.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QBM8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000136836.2	rab11fip3-201	3552	1183aa	ENSDARP00000120017.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7T005	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 3,552 bps, Translation length: 1,183 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7T005

Version

ENSDART00000136836.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.