Transcript: ENSDART00000136798.2 ptprsa-202

Description

protein tyrosine phosphatase receptor type Sa [Source:ZFIN;Acc:ZDB-GENE-020107-3]

Location

About this transcript

This transcript has 3 exons, is annotated with 7 domains and features, is associated with 204 variant alleles and maps to 46 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000083308.6	ptprsa-201	5842	1918aa	ENSDARP00000077743.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145114.3	ptprsa-203	6210	1797aa	ENSDARP00000118236.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000136798.2	ptprsa-202	508	169aa	ENSDARP00000114304.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 508 bps, Translation length: 169 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000136798.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.