Transcript: ENSDART00000136772.3 ABCA4-202

Description

ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]

Location

About this transcript

This transcript has 48 exons, is annotated with 61 domains and features, is associated with 1897 variant alleles and maps to 227 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000136772.3	ABCA4-202	7045	2277aa	ENSDARP00000123162.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147063.3	ABCA4-201	1421	300aa	ENSDARP00000118586.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000184941.1	ABCA4-203	894	297aa	ENSDARP00000144786.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000079770.5	ABCA4-204	859	280aa	ENSDARP00000074222.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6GML4	-

Summary

Statistics

Exons: 48, Coding exons: 48, Transcript length: 7,045 bps, Translation length: 2,277 residues

Version

ENSDART00000136772.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.