Transcript: ENSDART00000136766.2 RBMS3-203

Description

RNA binding motif, single stranded interacting protein [Source:ZFIN;Acc:ZDB-GENE-060929-244]

Location

Chromosome 16: 39,745,170-39,858,716 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 14 domains and features, is associated with 1621 variant alleles and maps to 41 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000044574.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000138388.3	RBMS3-206	1733	409aa	ENSDARP00000115595.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000136719.3	RBMS3-204	1256	415aa	ENSDARP00000123440.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGV3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137079.3	RBMS3-205	696	194aa	ENSDARP00000112611.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000136766.2	RBMS3-203	548	144aa	ENSDARP00000115294.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000132562.3	RBMS3-201	827	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000139089.2	RBMS3-202	727	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 548 bps, Translation length: 144 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000136766.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000136766.2 RBMS3-203

Summary

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Transcript: ENSDART00000136766.2 RBMS3-203

Summary

About Us

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