Transcript: ENSDART00000136760.2 alg11-202

Description

ALG11 alpha-1,2-mannosyltransferase [Source:NCBI gene;Acc:407614]

Gene Synonyms

fj04e04, si:dkey-1h24.5, wu:fj04e04

Location

Chromosome 1: 29,755,022-29,761,086 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 457 variant alleles and maps to 68 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000031202.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000049514.6	alg11-201	2846	500aa	ENSDARP00000049513.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R333	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000183571.1	alg11-204	2741	471aa	ENSDARP00000153500.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QEZ2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000140345.3	alg11-203	841	265aa	ENSDARP00000123442.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QC13	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000136760.2	alg11-202	690	195aa	ENSDARP00000120840.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QIG5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 690 bps, Translation length: 195 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000136760.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000136760.2 alg11-202

Summary

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Transcript: ENSDART00000136760.2 alg11-202

Summary

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