Transcript: ENSDART00000136716.3 fam133b-203

Description

family with sequence similarity 133 member B [Source:ZFIN;Acc:ZDB-GENE-060503-229]

Location

Chromosome 19: 40,337,554-40,344,737 forward strand.

About this transcript

This transcript has 8 exons, is associated with 373 variant alleles and maps to 67 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000013863.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000089547.6	fam133b-201	1245	259aa	ENSDARP00000083980.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1A5I1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140857.3	fam133b-204	775	216aa	ENSDARP00000119134.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000135648.3	fam133b-202	678	208aa	ENSDARP00000115324.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000136716.3	fam133b-203	592	117aa	ENSDARP00000125696.1	Nonsense mediated decay	-	-
ENSDART00000147391.2	fam133b-205	700	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 8, Coding exons: 6, Transcript length: 592 bps, Translation length: 117 residues

Version

ENSDART00000136716.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000136716.3 fam133b-203

Summary

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Transcript: ENSDART00000136716.3 fam133b-203

Summary

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