Transcript: ENSDART00000136694.2 si:dkey-261p22.1-202

Description

si:dkey-261p22.1 [Source:ZFIN;Acc:ZDB-GENE-081103-60]

Location

About this transcript

This transcript has 3 exons, is associated with 15 variant alleles and maps to 265 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000147130.6	si:dkey-261p22.1-203	3643	1179aa	ENSDARP00000115543.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185246.1	si:dkey-261p22.1-205	5379	224aa	ENSDARP00000152436.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000101961.5	si:dkey-261p22.1-201	2836	936aa	ENSDARP00000092736.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000183525.1	si:dkey-261p22.1-204	2836	936aa	ENSDARP00000146678.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000136694.2	si:dkey-261p22.1-202	689	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 689 bps,

Version

ENSDART00000136694.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.