Transcript: ENSDART00000136692.3 CCNL1-201

Description

cyclin L1a [Source:ZFIN;Acc:ZDB-GENE-050419-206]

Location

Chromosome 18: 41,512,102-41,526,488 forward strand.

About this transcript

This transcript has 12 exons, is associated with 382 variant alleles and maps to 406 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000055124.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000077435.4	CCNL1-205	2106	534aa	ENSDARP00000071902.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139696.3	CCNL1-206	2499	155aa	ENSDARP00000114934.1	Nonsense mediated decay	-
ENSDART00000126563.4	CCNL1-203	948	155aa	ENSDARP00000110530.2	Nonsense mediated decay	-
ENSDART00000136692.3	CCNL1-201	3832	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
ENSDART00000141027.2	CCNL1-204	1564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
ENSDART00000134284.2	CCNL1-202	496	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 12, Coding exons: 0, Transcript length: 3,832 bps,

Version

ENSDART00000136692.3

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000136692.3 CCNL1-201

Summary

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Transcript: ENSDART00000136692.3 CCNL1-201

Summary

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