Transcript: ENSDART00000136590.3 scospondin-202

Description

subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]

Location

About this transcript

This transcript has 19 exons, is annotated with 23 domains and features, is associated with 541 variant alleles and maps to 134 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000097773.5	scospondin-201	13902	4633aa	ENSDARP00000088544.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QSL8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000136590.3	scospondin-202	3029	899aa	ENSDARP00000120990.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QM61	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 19, Coding exons: 18, Transcript length: 3,029 bps, Translation length: 899 residues

Version

ENSDART00000136590.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.