Transcript: ENSDART00000136558.3 NUP35-203

Description

nucleoporin 35 [Source:ZFIN;Acc:ZDB-GENE-030131-9407]

Location

Chromosome 9: 12,265,549-12,269,847 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 7 domains and features, is associated with 175 variant alleles and maps to 48 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000012222.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000032344.7	NUP35-201	1756	308aa	ENSDARP00000033355.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P6X9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000191901.1	NUP35-205	3205	299aa	ENSDARP00000149133.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000144734.2	NUP35-202	759	227aa	ENSDARP00000123351.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000136558.3	NUP35-203	710	230aa	ENSDARP00000117749.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000131766.3	NUP35-204	532	112aa	ENSDARP00000116419.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 710 bps, Translation length: 230 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000136558.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000136558.3 NUP35-203

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000136558.3 NUP35-203

Summary

About Us

Get help

Our sister sites

Follow us