Transcript: ENSDART00000136541.3 ZNF143-201

Description

zinc finger protein 143b [Source:ZFIN;Acc:ZDB-GENE-040426-1586]

Location

About this transcript

This transcript has 16 exons, is annotated with 37 domains and features, is associated with 295 variant alleles and maps to 204 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000136541.3	ZNF143-201	2194	647aa	ENSDARP00000122626.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000100117.3	ZNF143-203	2718	581aa	ENSDARP00000090890.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000022640.10	ZNF143-202	2712	623aa	ENSDARP00000009795.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LYE3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 2,194 bps, Translation length: 647 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000136541.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.