Transcript: ENSDART00000136504.2 IFFO1-202

Description

intermediate filament family orphan 1b [Source:ZFIN;Acc:ZDB-GENE-050208-308]

Location

About this transcript

This transcript has 3 exons, is associated with 159 variant alleles and maps to 20 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000089386.6	IFFO1-201	2447	640aa	ENSDARP00000083819.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FC27	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000123011.3	IFFO1-203	1866	621aa	ENSDARP00000105038.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000136504.2	IFFO1-202	730	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 730 bps,

Version

ENSDART00000136504.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.