Transcript: ENSDART00000136489.2 mctp2a-202

Description

multiple C2 domains, transmembrane 2a [Source:ZFIN;Acc:ZDB-GENE-040724-63]

Location

About this transcript

This transcript has 12 exons, is annotated with 18 domains and features, is associated with 471 variant alleles and maps to 230 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000001102.7	mctp2a-201	2828	927aa	ENSDARP00000001617.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R4M9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189030.1	mctp2a-203	2726	893aa	ENSDARP00000146393.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000193765.1	mctp2a-204	1455	484aa	ENSDARP00000149319.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000136489.2	mctp2a-202	1264	422aa	ENSDARP00000117751.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,264 bps, Translation length: 422 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000136489.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.