Transcript: ENSDART00000136450.3 arhgap35b-202

Description

Rho GTPase activating protein 35b [Source:ZFIN;Acc:ZDB-GENE-060526-44]

Location

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 166 variant alleles and maps to 136 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000084819.5	arhgap35b-201	7912	1517aa	ENSDARP00000079254.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PF53	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184674.1	arhgap35b-203	4795	1517aa	ENSDARP00000155034.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PF53	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136450.3	arhgap35b-202	877	153aa	ENSDARP00000138554.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 877 bps, Translation length: 153 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000136450.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.