Transcript: ENSDART00000136412.2 tex30-202

Description

testis expressed 30 [Source:ZFIN;Acc:ZDB-GENE-041210-219]

Gene Synonyms

si:dkey-193n17.4, si:dkey-22a1.2

Location

Chromosome 9: 27,393,473-27,396,404 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features, is associated with 276 variant alleles and maps to 181 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000030636.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000136412.2	tex30-202	832	235aa	ENSDARP00000119504.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QEL1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000101401.6	tex30-201	827	224aa	ENSDARP00000092175.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q8A9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000186499.1	tex30-203	675	224aa	ENSDARP00000147278.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q7T5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 832 bps, Translation length: 235 residues

Version

ENSDART00000136412.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000136412.2 tex30-202

Summary

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Transcript: ENSDART00000136412.2 tex30-202

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