Transcript: ENSDART00000136374.4 mier2-202

Description

mesoderm induction early response 1, family member 2 [Source:ZFIN;Acc:ZDB-GENE-050208-795]

Location

About this transcript

This transcript has 13 exons, is annotated with 12 domains and features, is associated with 628 variant alleles and maps to 155 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000105550.4	mier2-201	4980	406aa	ENSDARP00000096327.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q4S8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136374.4	mier2-202	2324	406aa	ENSDARP00000122799.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q4S8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148487.2	mier2-203	216	47aa	ENSDARP00000124939.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 11, Transcript length: 2,324 bps, Translation length: 406 residues

Version

ENSDART00000136374.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.