Transcript: ENSDART00000136281.2 si:ch211-243g18.2-203

Description

si:ch211-243g18.2 [Source:ZFIN;Acc:ZDB-GENE-030131-2830]

Location

Chromosome 10: 9,561,066-9,565,674 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 9 domains and features, is associated with 240 variant alleles and maps to 140 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000044261.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000028855.8	si:ch211-243g18.2-201	1681	428aa	ENSDARP00000031042.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6P9S6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000064977.6	si:ch211-243g18.2-202	1407	428aa	ENSDARP00000064976.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6P9S6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136281.2	si:ch211-243g18.2-203	553	116aa	ENSDARP00000120495.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 553 bps, Translation length: 116 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000136281.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000136281.2 si:ch211-243g18.2-203

Summary

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Transcript: ENSDART00000136281.2 si:ch211-243g18.2-203

Summary

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