Transcript: ENSDART00000136279.2 si:dkey-256e7.5-203

Description

si:dkey-256e7.5 [Source:ZFIN;Acc:ZDB-GENE-090313-282]

Location

About this transcript

This transcript has 2 exons, is associated with 141 variant alleles and maps to 23 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000142689.2	si:dkey-256e7.5-204	919	233aa	ENSDARP00000120992.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JIF8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000131559.2	si:dkey-256e7.5-202	454	152aa	ENSDARP00000118114.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QBR0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000136279.2	si:dkey-256e7.5-203	887	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 887 bps,

Version

ENSDART00000136279.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.