Transcript: ENSDART00000136256.2 stx17-202

Description

syntaxin 17 [Source:ZFIN;Acc:ZDB-GENE-041114-164]

Gene Synonyms

zgc:101617

Location

About this transcript

This transcript has 5 exons, is annotated with 4 domains and features, is associated with 9 variant alleles and maps to 58 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000132329.3	stx17-201	1572	292aa	ENSDARP00000114720.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QFP8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136256.2	stx17-202	665	168aa	ENSDARP00000113713.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QID0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 665 bps, Translation length: 168 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000136256.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.