Transcript: ENSDART00000136249.3 rbm44-202

Description

RNA binding motif protein 44 [Source:ZFIN;Acc:ZDB-GENE-030131-5562]

Location

About this transcript

This transcript has 7 exons, is annotated with 1 domain and feature, is associated with 288 variant alleles and maps to 53 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000101765.4	rbm44-201	3398	956aa	ENSDARP00000092541.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S6S9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136249.3	rbm44-202	562	167aa	ENSDARP00000115046.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000139270.3	rbm44-203	413	93aa	ENSDARP00000113039.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000144480.2	rbm44-204	470	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 562 bps, Translation length: 167 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000136249.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.