Transcript: ENSDART00000136211.2 rars1-203

Description

arginyl-tRNA synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9014]

Gene Synonyms

rars, wu:fa96g09, zgc:86730

Location

Chromosome 21: 35,328,025-35,335,372 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 15 domains and features, is associated with 339 variant alleles and maps to 41 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000054530.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000130626.4	rars1-201	2226	661aa	ENSDARP00000107383.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QLT9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132743.3	rars1-202	818	273aa	ENSDARP00000120272.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QCM2	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000145191.3	rars1-204	782	128aa	ENSDARP00000113410.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QJM9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000136211.2	rars1-203	688	229aa	ENSDARP00000120711.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QL29	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000146329.2	rars1-205	807	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 688 bps, Translation length: 229 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000136211.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000136211.2 rars1-203

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Transcript: ENSDART00000136211.2 rars1-203

Summary

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