Transcript: ENSDART00000136196.2 nefla-202

Description

neurofilament, light polypeptide a [Source:ZFIN;Acc:ZDB-GENE-091117-1]

Gene Synonyms

si:ch211-222n4.10

Location

Chromosome 21: 19,008,168-19,010,254 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 27 domains and features, is associated with 269 variant alleles and maps to 226 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000057568.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000136196.2	nefla-202	1848	616aa	ENSDARP00000114456.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QFD5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000128381.3	nefla-201	2798	390aa	ENSDARP00000106750.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F9E8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000176624.2	nefla-203	2718	520aa	ENSDARP00000143710.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286Y951	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,848 bps, Translation length: 616 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000136196.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000136196.2 nefla-202

Summary

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Transcript: ENSDART00000136196.2 nefla-202

Summary

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