Transcript: ENSDART00000136184.2 TJP2-202

Description

tight junction protein 2b (zona occludens 2) [Source:ZFIN;Acc:ZDB-GENE-040718-58]

Location

About this transcript

This transcript has 22 exons, is annotated with 58 domains and features, is associated with 1290 variant alleles and maps to 183 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000136184.2	TJP2-202	3937	1179aa	ENSDARP00000112709.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000092355.7	TJP2-201	1345	389aa	ENSDARP00000086787.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000018739.10	TJP2-204	1230	389aa	ENSDARP00000026529.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000137559.2	TJP2-203	746	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 3,937 bps, Translation length: 1,179 residues

Version

ENSDART00000136184.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.