Transcript: ENSDART00000136167.2 PALS1-201

Description

protein associated with LIN7 1, MAGUK p55 family member a [Source:ZFIN;Acc:ZDB-GENE-020712-1]

Location

Chromosome 17: 34,206,167-34,239,514 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 40 domains and features, is associated with 811 variant alleles and maps to 183 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000006272.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000136167.2	PALS1-201	2903	703aa	ENSDARP00000123304.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LVF4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000014306.7	PALS1-203	3048	703aa	ENSDARP00000015684.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LVF4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186775.1	PALS1-202	2421	703aa	ENSDARP00000151296.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LVF4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 2,903 bps, Translation length: 703 residues

Version

ENSDART00000136167.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000136167.2 PALS1-201

Summary

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Transcript: ENSDART00000136167.2 PALS1-201

Summary

About Us

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