Transcript: ENSDART00000136160.2 grip2a-203

Description

glutamate receptor interacting protein 2a [Source:ZFIN;Acc:ZDB-GENE-081104-132]

Gene Synonyms

fi03h07, grip2, grip2l, hec, si:ch211-150e8.7, si:ch73-250d21.1, wu:fi03h07

Location

Chromosome 8: 7,206,120-7,207,002 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 179 variant alleles and maps to 128 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000087187.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000092426.7	grip2a-201	3124	736aa	ENSDARP00000086858.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0V3R3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000132009.3	grip2a-202	3703	734aa	ENSDARP00000119973.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QCY5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000145345.2	grip2a-205	564	126aa	ENSDARP00000119006.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QBW7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000140726.2	grip2a-204	603	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000136160.2	grip2a-203	736	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 736 bps,

Version

ENSDART00000136160.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000136160.2 grip2a-203

Summary

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Transcript: ENSDART00000136160.2 grip2a-203

Summary

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