Transcript: ENSDART00000136120.2 si:dkey-246g23.4-202

Description

si:dkey-246g23.4 [Source:ZFIN;Acc:ZDB-GENE-050419-234]

Location

About this transcript

This transcript has 4 exons, is annotated with 10 domains and features, is associated with 2 variant alleles and maps to 99 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000009363.9	si:dkey-246g23.4-201	3509	425aa	ENSDARP00000015228.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QHU5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141813.3	si:dkey-246g23.4-203	655	118aa	ENSDARP00000116676.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5WVP5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000136120.2	si:dkey-246g23.4-202	652	121aa	ENSDARP00000123110.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5WVP4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 652 bps, Translation length: 121 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000136120.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.