Transcript: ENSDART00000136067.2 EPB41L2-201

Description

si:ch73-18b11.1 [Source:ZFIN;Acc:ZDB-GENE-070912-332]

Location

Chromosome 20: 2,292,584-2,298,970 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 11 domains and features, is associated with 269 variant alleles and maps to 43 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000093374.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000172130.2	EPB41L2-204	2793	930aa	ENSDARP00000136665.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000085281.6	EPB41L2-203	2280	759aa	ENSDARP00000079716.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000136067.2	EPB41L2-201	732	244aa	ENSDARP00000114238.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000134695.2	EPB41L2-202	388	34aa	ENSDARP00000122117.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 732 bps, Translation length: 244 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000136067.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000136067.2 EPB41L2-201

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Transcript: ENSDART00000136067.2 EPB41L2-201

Summary

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