Transcript: ENSDART00000136009.2 CNOT7-202

Description

CCR4-NOT transcription complex, subunit 7 [Source:ZFIN;Acc:ZDB-GENE-061013-29]

Location

About this transcript

This transcript has 7 exons, is associated with 594 variant alleles and maps to 244 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000092953.7	CNOT7-201	2242	286aa	ENSDARP00000087385.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q08BM8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186864.1	CNOT7-203	4086	286aa	ENSDARP00000156128.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q08BM8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136009.2	CNOT7-202	2602	224aa	ENSDARP00000113903.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 2,602 bps, Translation length: 224 residues

Version

ENSDART00000136009.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.