Transcript: ENSDART00000135989.4 CEP170-202

Description

centrosomal protein 170Aa [Source:ZFIN;Acc:ZDB-GENE-090312-109]

Location

About this transcript

This transcript has 19 exons, is annotated with 56 domains and features, is associated with 2449 variant alleles and maps to 170 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000135989.4	CEP170-202	6847	1479aa	ENSDARP00000115940.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QAR8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000108709.5	CEP170-203	7401	1320aa	ENSDARP00000102810.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000185831.1	CEP170-204	285	94aa	ENSDARP00000148846.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000170943.2	CEP170-201	429	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 19, Coding exons: 18, Transcript length: 6,847 bps, Translation length: 1,479 residues

Version

ENSDART00000135989.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.