Transcript: ENSDART00000135945.4 rpsa-202

Description

ribosomal protein SA [Source:NCBI gene;Acc:394027]

Gene Synonyms

laminin receptor 1 (ribosomal protein SA), lamr1, zgc:55831, zgc:77824

Location

About this transcript

This transcript has 8 exons, is annotated with 22 domains and features, is associated with 695 variant alleles and maps to 200 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000135945.4	rpsa-202	2351	308aa	ENSDARP00000123183.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GNT1 Q803F6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189664.1	rpsa-203	4701	308aa	ENSDARP00000155439.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GNT1 Q803F6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000114282.3	rpsa-201	410	90aa	ENSDARP00000101074.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	J9JI05	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 2,351 bps, Translation length: 308 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q803F6

Version

ENSDART00000135945.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.