Transcript: ENSDART00000135877.3 ALS2-202

Description

alsin Rho guanine nucleotide exchange factor ALS2 a [Source:ZFIN;Acc:ZDB-GENE-070402-2]

Location

Chromosome 9: 13,641,668-13,672,200 forward strand.

About this transcript

This transcript has 25 exons, is annotated with 35 domains and features, is associated with 288 variant alleles and maps to 87 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000075111.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000108844.4	ALS2-204	5142	1662aa	ENSDARP00000097741.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8N7TEA8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135877.3	ALS2-202	2979	992aa	ENSDARP00000118825.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000128630.3	ALS2-203	1337	401aa	ENSDARP00000105175.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000143432.2	ALS2-201	377	126aa	ENSDARP00000114054.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 25, Coding exons: 25, Transcript length: 2,979 bps, Translation length: 992 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000135877.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000135877.3 ALS2-202

Summary

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Transcript: ENSDART00000135877.3 ALS2-202

Summary

About Us

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