Transcript: ENSDART00000135864.3 ptpa-202

Description

protein phosphatase 2 phosphatase activator [Source:ZFIN;Acc:ZDB-GENE-040801-11]

Gene Synonyms

fc23d07, ppp2r4, wu:fc23d07, zgc:92766

Location

About this transcript

This transcript has 10 exons, is annotated with 11 domains and features, is associated with 80 variant alleles and maps to 211 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000135864.3	ptpa-202	1991	324aa	ENSDARP00000118562.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2CF49	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000188900.1	ptpa-203	6264	324aa	ENSDARP00000157222.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2CF49	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000050041.8	ptpa-201	558	185aa	ENSDARP00000050040.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QG33	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,991 bps, Translation length: 324 residues

Version

ENSDART00000135864.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.