Transcript: ENSDART00000135794.3 selenon-201

Description

selenoprotein N [Source:ZFIN;Acc:ZDB-GENE-030327-7]

Gene Synonyms

SePN, cb686, selN, sepn1, wu:fb06g01, wu:fb73d02, wu:fv41b08, zgc:101091

Location

About this transcript

This transcript has 12 exons, is annotated with 8 domains and features, is associated with 531 variant alleles and maps to 222 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000135794.3	selenon-201	2873	557aa	ENSDARP00000119529.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137713.2	selenon-202	609	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
ENSDART00000140653.2	selenon-203	513	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,873 bps, Translation length: 557 residues

Version

ENSDART00000135794.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.