Transcript: ENSDART00000135785.2 si:ch211-153a8.4-202

Description

si:ch211-153a8.4 [Source:ZFIN;Acc:ZDB-GENE-030131-6830]

Gene Synonyms

fa07c11, wu:fa07c11

Location

Chromosome 23: 12,455,329-12,465,083 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 3 domains and features, is associated with 32 variant alleles and maps to 44 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000109646.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000182259.1	si:ch211-153a8.4-204	5694	391aa	ENSDARP00000145938.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q4S9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000193043.1	si:ch211-153a8.4-205	5592	357aa	ENSDARP00000154202.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QND7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000143752.3	si:ch211-153a8.4-203	892	267aa	ENSDARP00000112625.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QD60	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000135785.2	si:ch211-153a8.4-202	786	243aa	ENSDARP00000117433.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QE20	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 786 bps, Translation length: 243 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000135785.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000135785.2 si:ch211-153a8.4-202

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Transcript: ENSDART00000135785.2 si:ch211-153a8.4-202

Summary

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