Transcript: ENSDART00000135783.4 selenoj-201

Description

selenoprotein J [Source:ZFIN;Acc:ZDB-GENE-030131-4163]

Gene Synonyms

fb98a02, fc76f01, im:6797427, selj, si:dkey-74f15.2, wu:fb26a06, wu:fb98a02, wu:fc76f01

Location

About this transcript

This transcript has 10 exons, is annotated with 7 domains and features, is associated with 360 variant alleles and maps to 82 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000135783.4	selenoj-201	1401	342aa	ENSDARP00000142458.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LGS9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138756.2	selenoj-202	359	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000146204.2	selenoj-203	705	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,401 bps, Translation length: 342 residues

Version

ENSDART00000135783.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.