Transcript: ENSDART00000135768.3 lrp1ba-203

Description

low density lipoprotein receptor-related protein 1Ba [Source:ZFIN;Acc:ZDB-GENE-050208-608]

Gene Synonyms

lrp1b, si:ch211-181p13.1, si:dkeyp-122a9.3

Location

About this transcript

This transcript has 35 exons, is annotated with 168 domains and features, is associated with 2180 variant alleles and maps to 155 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000135768.3	lrp1ba-203	4890	1629aa	ENSDARP00000121953.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L8K6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000188796.1	lrp1ba-204	507	168aa	ENSDARP00000154554.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QP77	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 35, Coding exons: 35, Transcript length: 4,890 bps, Translation length: 1,629 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000135768.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.