Transcript: ENSDART00000135703.2 hsbp1b-203

Description

heat shock factor binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1721]

Gene Synonyms

hsbp1, zgc:73224

Location

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 4 variant alleles and maps to 223 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000061435.7	hsbp1b-201	786	76aa	ENSDARP00000061434.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PBV8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135703.2	hsbp1b-203	389	62aa	ENSDARP00000112904.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RCS5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000133219.2	hsbp1b-202	604	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 389 bps, Translation length: 62 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000135703.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.