Transcript: ENSDART00000135642.3 MSI2-204

Description

musashi RNA-binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030826-25]

Location

Chromosome 10: 37,500,246-37,573,759 forward strand.

About this transcript

This transcript has 6 exons, is associated with 804 variant alleles and maps to 27 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000033901.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000132096.3	MSI2-203	2259	388aa	ENSDARP00000123512.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZW10	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000099473.3	MSI2-205	1169	388aa	ENSDARP00000090247.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZW10	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135642.3	MSI2-204	521	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000141183.2	MSI2-201	493	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000134104.3	MSI2-202	406	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 521 bps,

Version

ENSDART00000135642.3

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000135642.3 MSI2-204

Summary

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Transcript: ENSDART00000135642.3 MSI2-204

Summary

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