Transcript: ENSDART00000135564.2 fermt1-202

Description

fermitin family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3264]

Gene Synonyms

fc32b07, kindlin-1, si:ch73-22c10.1, wu:fc32b07

Location

Chromosome 20: 45,787,047-45,796,675 reverse strand.

About this transcript

This transcript has 7 exons, is associated with 6 variant alleles and maps to 39 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000052652.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000147897.2	fermt1-204	2566	661aa	ENSDARP00000116317.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QBZ4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000074546.7	fermt1-201	1986	661aa	ENSDARP00000069034.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QBZ4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147637.2	fermt1-203	415	127aa	ENSDARP00000122875.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QJJ7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000135564.2	fermt1-202	859	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 859 bps,

Version

ENSDART00000135564.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000135564.2 fermt1-202

Summary

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Transcript: ENSDART00000135564.2 fermt1-202

Summary

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