Transcript: ENSDART00000135540.2 nrip1a-202

Description

nuclear receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040723-8]

Gene Synonyms

RIP140-A, SAGp4, nrip1l, t2gtlp4

Location

About this transcript

This transcript has 2 exons, is annotated with 30 domains and features, is associated with 956 variant alleles and maps to 262 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000135540.2	nrip1a-202	4573	1080aa	ENSDARP00000114091.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QMY9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000099956.5	nrip1a-201	3243	1080aa	ENSDARP00000099382.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QMY9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 4,573 bps, Translation length: 1,080 residues

Version

ENSDART00000135540.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.