Transcript: ENSDART00000135470.2 tbc1d16-201

Description

TBC1 domain family, member 16 [Source:ZFIN;Acc:ZDB-GENE-041010-179]

Gene Synonyms

fi28h02, wu:fi28h02, zgc:101681

Location

Chromosome 3: 18,437,476-18,470,745 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 10 domains and features, is associated with 81 variant alleles and maps to 78 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000036994.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000136243.3	tbc1d16-202	2660	717aa	ENSDARP00000122393.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FE32	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182342.1	tbc1d16-204	5843	717aa	ENSDARP00000150892.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FE32	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135470.2	tbc1d16-201	1265	327aa	ENSDARP00000114150.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QJX4	-
ENSDART00000184882.1	tbc1d16-205	1244	327aa	ENSDARP00000146417.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QJX4	-
ENSDART00000144690.2	tbc1d16-203	594	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,265 bps, Translation length: 327 residues

Version

ENSDART00000135470.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000135470.2 tbc1d16-201

Summary

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Transcript: ENSDART00000135470.2 tbc1d16-201

Summary

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