Transcript: ENSDART00000135459.3 rpl12-202

Description

ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-030131-5297]

Gene Synonyms

wu:fa27c04, wu:fa91d03, wu:fb14g09, wu:fj26g11, zgc:103615

Location

About this transcript

This transcript has 4 exons, is associated with 283 variant alleles and maps to 197 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000008807.8	rpl12-201	787	165aa	ENSDARP00000009096.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DRE6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185317.1	rpl12-205	523	166aa	ENSDARP00000150760.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QFL0	-
ENSDART00000141676.3	rpl12-203	766	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000135459.3	rpl12-202	818	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000144695.2	rpl12-204	569	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 818 bps,

Version

ENSDART00000135459.3

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.