Transcript: ENSDART00000135449.3 st3gal5-202

Description

ST3 beta-galactoside alpha-2,3-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-1]

Gene Synonyms

GM3 synthase, ST3Gal5, st3gal5-r1, wu:fc08a12, zST3GalV-1

Location

Chromosome 14: 9,481,443-9,485,352 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 2 domains and features, is associated with 374 variant alleles and maps to 32 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000037556.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000054690.7	st3gal5-201	2312	364aa	ENSDARP00000054689.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RCA6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000161486.2	st3gal5-205	2418	364aa	ENSDARP00000133508.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RCA6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135449.3	st3gal5-202	944	41aa	ENSDARP00000118337.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QJC9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000137274.2	st3gal5-203	605	183aa	ENSDARP00000119698.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QDZ4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000147923.2	st3gal5-204	4054	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 944 bps, Translation length: 41 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000135449.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000135449.3 st3gal5-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000135449.3 st3gal5-202

Summary

About Us

Get help

Our sister sites

Follow us