Transcript: ENSDART00000135363.3 ftsj1-202

Description

FtsJ RNA 2'-O-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-041114-83]

Gene Synonyms

fb17g12, wu:fb17g12, zgc:101831

Location

Chromosome 21: 21,174,717-21,178,699 reverse strand.

About this transcript

This transcript has 10 exons, is associated with 257 variant alleles and maps to 93 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000057089.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000079678.7	ftsj1-201	1473	323aa	ENSDARP00000074130.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QDU3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185277.1	ftsj1-205	4128	323aa	ENSDARP00000147724.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QDU3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145872.3	ftsj1-204	808	167aa	ENSDARP00000113647.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QIQ0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000141341.2	ftsj1-203	434	127aa	ENSDARP00000113491.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QJK6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000135363.3	ftsj1-202	768	64aa	ENSDARP00000124607.1	Nonsense mediated decay	F8W2U2	-

Summary

Statistics

Exons: 10, Coding exons: 3, Transcript length: 768 bps, Translation length: 64 residues

Version

ENSDART00000135363.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000135363.3 ftsj1-202

Summary

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Transcript: ENSDART00000135363.3 ftsj1-202

Summary

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