Transcript: ENSDART00000135261.2 u2surp-204

Description

U2 snRNP-associated SURP domain containing [Source:ZFIN;Acc:ZDB-GENE-070912-400]

Gene Synonyms

mp:zf637-1-000918, si:dkey-181m9.9, wu:fa03e02, wu:fb38b01, wu:fc75d03

Location

Chromosome 2: 26,630,615-26,631,518 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 166 variant alleles and maps to 60 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000061490.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000087714.7	u2surp-201	3295	968aa	ENSDARP00000082147.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QCG7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000132651.3	u2surp-202	3913	923aa	ENSDARP00000122954.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S5J3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000132854.2	u2surp-203	829	276aa	ENSDARP00000112741.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RCX6	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000135261.2	u2surp-204	719	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 719 bps,

Version

ENSDART00000135261.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000135261.2 u2surp-204

Summary

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Transcript: ENSDART00000135261.2 u2surp-204

Summary

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